Irreducible complexity, as defined by Michael Behe in Darwin's Black Box is a property of a system such that if any part is removed, the system ceases to function. Irreducible complexity is often used as an argument for Intelligent design.
The classic illustration of an irreducibly complex system is a mousetrap: it consists of a base, hammer, spring, catch (or trigger), and fasteners to hold the pieces together. If any of those parts is removed, the mousetrap no longer works.
The argument, then, is that since evolution proceeds by adding parts to an existing system one by one, the precursors of an irreducibly complex system would have been useless, and would not have been selected for. Ergo, all of the pieces had to be put together by an intelligent designer.
The argument that evolution always proceeds by adding parts is false. Natural selection can remove parts as well as add them. For instance, whales have no hind legs, but retain vestigial pelvises where their ancestors' legs were attached.
Another example of an irreducibly complex system is a gothic arch: if any stone is removed, the arch falls down. The way to build such a system is to install a scaffold, build the arch, then remove the scaffolding. Similarly, biological mechanisms do not have to co-exist with the structures that allowed them to evolve the way they did. There is therefore no reason to accept the claim that if a system is irreducibly complex that it cannot be built gradually.
Systems incomplete for one function can serve a different function
While it is true that an irreducibly complex system with a missing part loses its nominal function, it may still have some other function. For instance, a mousetrap without a catch is no longer a working mousetrap, but can still work as a tie clip, or a paperweight. A mousetrap without a base can be nailed to the floor. Such a mousetrap would not be as useful, but would still function.
For a biological example, consider the bacterial flagellum, a long spinning hair that functions as an "outboard motor" for bacteria. It is often cited as an example of an irreducibly complex system. But if some of its parts are removed, the resulting system bears a striking similarity to the Type Three Secretory System, a "syringe" that allows bacteria to infect other cells.
Argumentum ad Ignorantiam
No potential example of a supposed irreducibly complex system can, even in theory, demonstrate that it did not evolve from less complex components. One can only demonstrate how a system can be reduced, or claim ignorance as to how it can be. Irreducible complexity is therefore an argument from ignorance and, more specifically, a God of the gaps argument.
A claim that a system is irreducibly complex is not a falsifiable claim. Demonstrating how a complex system can be reduced to less complex components only shows the apologist to be wrong on that particular example. Each 'reduced' component is, in turn, another system susceptible to the same claim of being irreducibly complex, ad infinitum. This lack of falsifiability makes such claims unscientific.